Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908568.1_cds_XP_016458708.1_52307
CDS Infomation

[gene=LOC107782346] [db_xref=GeneID:107782346] [protein=DEAD-box ATP-dependent RNA helicase 38-like] [protein_id=XP_016458708.1] [location=join(12202..12462,12551..12844,13683..13967,18096..18512,18718..18829,21200..21285,22664..22726)] [gbkey=CDS]
Sequence

ATGGCTGACAGTTCTAGTACCACCAGTAGCACTACCGCGTTCGTCGCTGACAGTTCTAGT
GCCACCAGCAGCACCGCCGCTTCTACGACGGCAAAGTCACGAGAAACTAGAAGCTGGGCA
GACGAAGCCGACGAGATAGATCAAGCCGAGCAGTCTGAAAACGCTAGCGCCGAGACTGAA
ATTGGATCTCTACAAATTGACGAGTCCAAAAGAGTCAACAACTCCACTCTTGATGATCCA
GTAGATTCCAGAATAGAAGCCGTTACATCTGGCGACACGTTGTACAAATCAGCGAAGAGA
TTTGAGGATTTGAACTTGTCTCCTGAGTTATTGAAGGGATTATATGTAGAGATGAAGTTT
GAGCGACCTAGCAAAATTCAAGAGATTAGTTTACCCATGATTCTTACGCCGCCCTACAAG
AATCTTATTGCTCAGGCTCATAATGGCTCTGGTAAAACTACTTGCTTTGTACTTGGAATG
TTGAGTCGGGTCGATCCGAAGCTTCGTGCACCTCAAGCTCTCTGTATTTGTCCAACCAGA
GAATTGGCTATTCAGAATATGGAAGTGCTGTTGAAGATGGGGAATTTCACTGGTATAACA
TCAGAGTTAGCTATCCCAGCAGATGCAGCCAACTACATACCAATTTCAAAGCGGCCACCT
GTGTCAGCACAAGTAGTAATTGGCACACCTGGAACTATAAATAAGTGGGTGACAGCAAGG
AAACTGGGCATGAGTTGCATGAAGATTCTTGTATTTGATGAAGCGGACCACATGTTGGCA
GAGGTAATTGATTCACTATCAGCACTTACGATAGTTCCTTTGATTTTTTCCCTTTTTGTT
GTGCTTTTGTTTTCTGCAACGTTTGGGGAAAGTGTCAAATCATTTGTGACAAAAATTGTT
AGAGATCTTTTCGTGAAAGATTATAACCAGATGTTTGTGAAGAAAGAAGAACTTTCGCTG
GATTCAGTGAAGCAGTATAAAGTGCAGTGTCCGGATGAACTTTCAAAAGTCATGGTGATT
AAAGACAAAATTCTTGAACTAGGACAGAAGGTGGGGCAAACAATTATATTTGTTCGTACA
AGAAACAGTGCGAGTATGTTGCATAAATCATTGGTGGACTATGGCTATGAAGTGACAACA
ATTCAAGGGGCTCTTAAGCAAGAAGATAGAGACAAAATAATCAAGGAGTTCAAAGAAGGA
TTGACACAAGTTCTTATATCAACTGATCTTCTTGCTCGTGGATTTGATCAATCGCAGGTT
AATTTAGTGGTTAATTATGATCTCCCTGTAAGACATGAGAGTCCATCAGAGCCAGATCAT
GAGGTATACTTGCATCGGATTGGTAGAGCAGGGCGTTTTGGCCGCAAAGGTGCCATATTC
AACTTGCTCTGCGATGACCAAGACAACATGCTGATGTCAAAGATTGAGAACCATTTCAAT
AGTCAAGTGACTGAGATCGCCTCATGGAAAAGTGAGGAGGATTTTGAGAATGCTCTGAAG
AAAGCTGGCTTGCTCTAA

Peptide Sequence

PEP ID

XP_016458708.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Nicotiana tabacum]
Sequence

MADSSSTTSSTTAFVADSSSATSSTAASTTAKSRETRSWADEADEIDQAEQSENASAETE
IGSLQIDESKRVNNSTLDDPVDSRIEAVTSGDTLYKSAKRFEDLNLSPELLKGLYVEMKF
ERPSKIQEISLPMILTPPYKNLIAQAHNGSGKTTCFVLGMLSRVDPKLRAPQALCICPTR
ELAIQNMEVLLKMGNFTGITSELAIPADAANYIPISKRPPVSAQVVIGTPGTINKWVTAR
KLGMSCMKILVFDEADHMLAEVIDSLSALTIVPLIFSLFVVLLFSATFGESVKSFVTKIV
RDLFVKDYNQMFVKKEELSLDSVKQYKVQCPDELSKVMVIKDKILELGQKVGQTIIFVRT
RNSASMLHKSLVDYGYEVTTIQGALKQEDRDKIIKEFKEGLTQVLISTDLLARGFDQSQV
NLVVNYDLPVRHESPSEPDHEVYLHRIGRAGRFGRKGAIFNLLCDDQDNMLMSKIENHFN
SQVTEIASWKSEEDFENALKKAGLL

Transcript Sequence

Gene sequence data has not been registered.